2019
●Huang SQ, Ichikawa Y, Yoshitake K, Kinoshita S, Igarashi Y, Omori F, Maeyama K, Nagai K, Watabe S, and Asakawa S. Identification and characterization of microRNAs and their predicted functions in biomineralization in the pearl oyster (Pinctada fucata). Biology. 2019, 8(2), 47.
●Igarashi Y, Mori D, Mitsuyama S, Yoshitake K, Ono H, Watanabe T, Taniuchi Y, Sakami T, Kuwata A, Kobayashi T, Ishino Y, Watabe S, Gojobori T, and Asakawa S. A Preliminary Metagenome Analysis Based on a Combination of Protein Domains. Proteomes. 2019, 7(2), 19.
●Kraitavin W, Yoshitake K, Igarashi Y, Mitsuyama S, Kinoshita S, Kambayashi D, Watabe S, and Asakawa S. Transcriptome analysis of yamame (Oncorhynchus masou) in normal conditions after heat stress. Biology. 2019,8:21.
●Mariom, Take S, Igarashi Y, Yoshitake K, Asakawa S, Maeyama K, Nagai K, Watabe S, and Kinoshita S. Gene expression profiles at different stages for formation of pearl sac and pearl in the pearl oyster Pinctada fucata. BMC Genomics. 2019,20:240.
●Huang SQ, Ichikawa Y, Igarashi Y, Yoshitake K, Kinoshita K, Omori F, Maeyama K, Nagai K, Watabe S, and Asakawa S. Piwi-interacting RNA (piRNA) expression patterns in pearl oyster (Pinctada fucata) somatic tissues. Scientific Reports.2019,9:247.
2018
●Kijima Y, Wang W, Igarashi Y, Yoshitake K, Asakawa S, Suzuki Y, Watabe S, and Kinoshita S. Age-associated different transcriptome profiling in zebrafish and rat: insight into diversity of vertebrate aging, bioRxiv, doi: https://doi.org/10.1101/478438.
●Yoshitake K, Igarashi Y, Mizukoshi M, Kinoshita S, Mitsuyama S, Suzuki Y, Saito K, Watabe S, and Asakawa S. Artificially designed hybrids facilitate efficient generation of high-resolution linkage maps. Scientific Reports. 2018,8:16104.
●Shinohara M, Kinoshita S, Tang E, Funabara D, Kakinuma M, Maeyama K, Nagai K, Awaji M, Watabe S, and Asakawa S. Comparison of Two Pearl Sacs Formed in the Same Recipient Oyster with Different Genetic Background Involved in Yellow Pigmentation in Pinctada fucata. Mar Biotechnol. 2018,20:594-602.
●Elbialy A, Asakawa S, Watabe S, and Kinoshita S. A Zebrafish Acromegaly Model Elevates DNA Damage and Impairs DNA Repair Pathways. Biology. 2018,7:4.
●De Silva DPN, Tan E, Mizuno N, Hosoya S, Reza Md S, Watabe S, Kinoshita S, and Asakawa S. Transcriptomic analysis of immunoglobulin novel antigen receptor (IgNAR) heavy chain constant domains of brownbanded bamboo shark (Chiloscyllium punctatum). Fish and Shellfish Immunology. 2018,84:370-376.
●Igarashi Y, Zhang H, Tan E, Sekino M, Yoshitake K, Kinoshita S, Mitsuyama S, Yoshinaga T, Chow S, Kurogi H, Shinoda A, Han Y.-S, Wakiya R, Mochioka N, Yamamoto T, Kuwada H, Kaji Y, Suzuki Y, Gojobori T, Kobayashi T, Saitoh K, Watabe S, and Asakawa S. Whole-Genome Sequencing of 84 Japanese Eels Reveals Evidence against Panmixia and Support for Sympatric Speciation. Genes. 2018,9:474.
●Xu Z, and Asakawa S. Physiological RNA dynamics in RNA-Seq analysis. Briefings in Bioinformatics. 2018,bby045.
●Koyama H, Mizusawa N, Hoashi M, Tan E, Yasumoto K, Jimbo M, Ikeda D, Yokoyama T, Asakawa S, Piyapattanakorn S, Watabe S. Changes in free amino acid concentrations and associated gene expression profiles in the abdominal muscle of kuruma shrimp Marsupenaeus japonicus acclimated at different salinities. J Exp Biol. 2018, jeb.168997.
●Fu X, Sun J, Tan E, Shimizu K, Reza MS, Watabe S, Asakawa S. High-Throughput Sequencing of the Expressed Torafugu (Takifugu rubripes) Antibody Sequences Distinguishes IgM and IgT Repertoires and Reveals Evidence of Convergent Evolution. Front Immunol. 2018, 21;9:251.
●Honein K, Jagoda SSSS, Arulkanthan A, Ushio H, Asakawa S. Draft Genome Sequence of Aeromonas hydrophila Strain Ae25, Isolated from a Septicemic Moribund Koi Carp (Cyprinus carpio) in Sri Lanka. Genome Announc. 2018, 1;6(5).
●Zhang X, Mizukoshi M, Zhang H, Tan E, Igarashi Y, Suzuki Y, Mitsuyama S, Kinoshita S, Saito K, Watabe S and Asakawa A. Ultrahigh-Density Linkage Map Construction Using Low-Coverage Whole-Genome Sequencing of a Doubled Haploid Population: Case Study of Torafugu (Takifugu rubripes). Genes. 2018,9(3).
●Kinoshita S, Ceyhun SB, Md A, Siddique BS, Akolkar DB, Asakawa S, Watabe S. Promoter analysis of the fish gene of slow/cardiac-type myosin heavy chain implicated in specification of muscle fiber types. Fish Physiol Biochem. 2018,44(2):679-691.
●Ohmori F, Kinoshita S, Funabara D, Koyama H, Nagai K, Maeyama K, Okamoto K, Asakawa S, Watabe S. Novel Isoforms of N16 and N19 Families Implicated for the Nacreous Layer Formation in the Pearl Oyster Pinctada fucata. Mar Biotechnol. 2018,20(2):155-167.
●Asaduzzaman M, Sofiab E, Shakil A, Haque NF, Khan NAM, Ikeda D, Kinoshita S, Abol-Munafi AB. Host gut-derived probiotic bacteria promote hypertrophic muscle progression and upregulate growth-related gene expression of slow-growing Malaysian Mahseer Tor tambroides. Aquaculture Reports. 2018,9:37-45.
2017 
●Kurokochi H, Zhang S, Takeuchi Y, Tan E, Asakawa S, Lian C. Local-Level Genetic Diversity and Structure of Matsutake Mushroom (Tricholoma matsutake) Populations in Nagano Prefecture, Japan, Revealed by 15 Microsatellite Markers. J Fungi (Basel). 2017, 11;3(2).
●Ikeda D, Koyama H, Mizusawa N, Kan-No N, Tan E, Asakawa S, Watabe S. Global gene expression analysis of the muscle tissues of medaka acclimated to low and high environmental temperatures., Comp Biochem Physiol Part D Genomics Proteomics. 2017, 24:19-28.
●Fu X, Zhang F, Watabe S, Asakawa S. Immunoglobulin light chain (IGL) genes in torafugu: Genomic organization and identification of a third teleost IGL isotype., Sci Rep. 2017, 7:40416.
●Asaduzzaman M, Ikeda D, Abol-Munafi AB, Bulbul M, Ali ME, Kinoshita S, Watabe S, Kader MA. Dietary supplementation of inosine monophosphate promotes cellular growth of muscle and upregulates growth-related gene expression in Nile tilapia Oreochromis niloticus. Aquaculture. 2017, 468:297-306.
●Okita K, Tan E, Satone H, Kinoshita S, Asakawa A, Ojima D, Yamazaki H, Sakiyama K, Takatani T, Arakawa O, Hagiwara S, Sakakura Y. Transcriptome analysis of tetrodotoxin sensing and tetrodotoxin action in the central nervous system of tiger puffer Takifugu rubripes juveniles. Fisheries Science. 2017:83(3),401-412.
●Kubota K, Tsuchihashi Y, Kogure T, Maeyama K, Hattori F, Kinoshita S, Sakuda S, Nagasawa H, Yoshimura E, Suzuki M. Structural and functional analyses of a TIMP and MMP in the ligament of Pinctada fucata. J Struct Biol. 2017,199:216-224.
●Asaduzzaman M, Ikeda D, Kader MA, KinoshitaS, Ghaffar MA, Abol-Munafi AB. Cellular muscle growth and molecular cloning and expression of growth-related gene of Malaysian Mahseer Tor tambroides larvae fed with live and formulated feeds in indoor nursery rearing system. Aquaculture Reports. 2017,5:1-9.
2016
●De S Jagoda SS, Honein K, Arulkanthan A, Ushio H, Asakawa S. Genome sequencing and annotation of Aeromonas veronii strain Ae52, a multidrug-resistant isolate from septicaemic gold fish (Carassius auratus) in Sri Lanka., Genom Data. 2016, 11:46-48.
●Kuroda R, Fujikura K, Abe M, Hosoiri Y, Asakawa S, Shimizu M, Umeda S, F Ichikawa F, Takahashi H. Diaphanous gene mutation affects spiral cleavage and chirality in snails, Sci Rep. 2016, 6:34809.
●Honein K, Jagoda SS, Arulkanthan A, Ushio H, Asakawa S. Draft Genome Sequences of Citrobacter freundii Strains CF04 and A41 Isolated from Moribund, Septicemic Giant Gourami (Osphronemus goramy) in Sri Lanka., Genome Announc. 2016, 4:e00820-16.
●Bekku YS, Kurokochi H, Matsuki Y, Tan E, Asakawa S, Imura S, Lian C. Development of 11 microsatellite markers in Pinus parviflora by the dual-suppression technique and next-generation sequencing. Journal of Forest Research. 2016, 21:193-196.
●Kaewkascholkul N, Somboonviwat K, Asakawa S, Hirono I, Tassanakajon A, Somboonwiwat K. Shrimp miRNAs regulate innate immune response against white spot syndrome virus infection., Dev Comp Immunol. 2016, 60:191-201..
●Takeuchi T, Asakawa S, Watabe S, et al. Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle. Zoological Lett., 2016, 2:3..
●Siddique BS, Kinoshita S, Wongkarangkana C, Asakawa S, Watabe S. Evolution and Distribution of Teleost myomiRNAs: Functionally Diversified myomiRs in Teleosts. Mar Biotechnol (NY). 2016 Jun;18(3):436-47.
●Asaduzzaman M, Shakur Ahammad AK, Asakawa S, Kinoshita S, Watabe S. 5'-flanking
sequences of zebrafish fast myosin heavy chain genes regulate unique expression
in the anterior, medial subsection and posterior tail somites of the skeletal
muscle. Comp Biochem Physiol B Biochem Mol Biol. 2016,191:1-12.
●Akolkar DB, Asaduzzaman M, Kinoshita S, Asakawa S, Watabe S. Characterization of Pax3 and Pax7 genes and their expression patterns during different development and growth stages of Japanese pufferfish Takifugu rubripes. Gene. 2016,575:21-28.
2015
●Kurokochi H, Tan E, Asakawa S, Lian C. Development of 18 microsatellite markers in Pieris japonica, a poisonous tree insulated from the browsing pressure of herbivores, using a next-generation sequencer. J For Res 2015, 20:244-247.
●Tan E, Kinoshita S, Suzuki Y, Ineno T, Tamaki K, Kera A, Muto K, Yada
T, Kitamura S, Asakawa S, Watabe S. Different gene expression profiles
between normal and thermally selected strains of rainbow trout, Oncorhynchus
mykiss, as revealed by comprehensive transcriptome analysis. Gene. 2015
S0378-1119(15)01236-6.
●Wongwarangkana C, Fujimori KE, Akiba M, Kinoshita S, Teruya M, Nezuo M,
Masatoshi T, Watabe S, Asakawa S. Deep sequencing, profiling and detailed
annotation of microRNAs in Takifugu rubripes. BMC Genomics. 2015,16:457
●Ahammad AK, Asaduzzaman M, Asakawa S, Watabe S, Kinoshita S. Regulation of
gene expression mediating indeterminate muscle growth in teleosts. Mech Dev. 2015,137:53-65.7
●Xi Fu, Hong Zhang, Engkong Tan, Shugo Watabe, Shuichi Asakawa. Characterization
of the torafugu (Takifugu rubripes) immunoglobulin heavy chain gene locus.
Immunogenetics,2015,67:179-193
2014
●Sugiura Nami, Kurokochi Hiroyuki, Tan Engkong, Asakawa Shuichi, Sato Naoki,
Saito Yoko, Ide Yuji, Development of 13 polymorphic chloroplast DNA markers
in Quercus gilva, a regionally endemic species in Japan, Conservation Genetics
Resources, 2014,6, 961-965
●Zhang H, Tan E, Suzuki Y, Hirose Y, Kinoshita S, Okano H, Kudoh J, Shimizu A, Saito K, Watabe S, Asakawa S. Dramatic improvement in genome assembly achieved using doubled-haploid genomes. Sci Rep. 2014 Oct 27;4:6780.
●Tan E, Chen Y, Kuan J, Lin C, Jagoda SS, Lin F, Tzou W, Kinoshita S, Watabe S, *Asakawa S, *Liu S. Draft Genome Sequence of Thermoanaerobacterium saccharolyticum Strain NTOU1, a Thermophilic Bacterium Isolated from Marine Shallow Hydrothermal Vents. Genome Announc. 2014 Oct 9;2(5). pii: e01019-14.(*co-correspondence)
●Kurokochi Hiroyuki, Tan Engkong, Asakawa Shuichi, Sukartiningsih, Saito Yoko, Ide Yuji, Development of 16 microsatellite markers in Eusideroxylon zwageri by next-generation sequencing, Conservation Genetics Resources, 6, 593-595, 2014
●Sato Masaaki, Kurokochi Hiroyuki, Tan Engkong, Asakawa Shuichi, Honda Kentaro, Bolisay Klenthon O, Nakamura Yohei, Lian Chunlan, Fortes Miguel D, Nakaoka Masahiro, Fifteen novel microsatellite markers for two Amphiprion species (Amphiprion frenatus and Amphiprion perideraion) and cross-species amplification, Conservation Genetics Resources, 6, 685-688, 2014
●Jagoda SS, Wijewardana TG, Arulkanthan A, Igarashi Y, Tan E, Kinoshita S, Watabe S, Asakawa S. Characterization and antimicrobial susceptibility of motile aeromonads isolated from freshwater ornamental fish showing signs of septicaemia. Dis Aquat Organ. 2014 May 13;109(2):127-37.
●Jagoda SS, Tan E, Arulkanthan A, Kinoshita S, Watabe S, Asakawa S. Draft Genome Sequence of Aeromonas hydrophila Strain Ae34, Isolated from a Septicemic and Moribund Koi Carp (Cyprinus carpio koi), a Freshwater Aquarium Fish. Genome Announc. 2014 Jun 12;2(3).
●Funabara D, Ohmori F, Kinoshita S, Koyama H, Mizutani S, Ota A, Osakabe Y, Nagai K, Maeyama K, Okamoto K, Kanoh S, Asakawa S, Watabe S. Novel genes participating in the formation of prismatic and nacreous layers in the pearl oyster as revealed by their tissue distribution and RNA interference knockdown. PLoS One. 2014 Jan 15;9(1):e84706.
●Miyamoto K, Suzuki N, Sakai K, Asakawa S, Okazaki T, Kudoh J, Ikeno M, Shimizu N. A novel mouse model for Down syndrome that harbor a single copy of human artificial chromosome (HAC) carrying a limited number of genes from human chromosome 21. Transgenic Res. 2014 Apr;23(2):317-29.
●Marcial, Helen S, Suga Koushirou, Kinoshita Shigaheru, Kaneko Gen, Hagiwara Atsushi, Watabe, Shugo, Molecular cloning and localization of GABA(A) receptor-associated protein in the rotifer Brachionus plicatilis, International Review of Hydrobiology, 99, 188-197, 2014
●Feroudj H, Matsumoto T, Kurosu Y, Kaneko G, Ushio H, Suzuki K, Kondo H, Hirono I, Nagashima Y, Akimoto S, Usui K, Kinoshita S, Asakawa S, Kodama M, Watabe S. DNA microarray analysis on gene candidates possibly related to tetrodotoxin accumulation in pufferfish. Toxicon. 2014 Jan;77:68-72.
2013
●Miyamoto H, Endo H, Hashimoto N, Limura K, Isowa Y, Kinoshita S, Kotaki T, Masaoka T, Miki T, Nakayama S, Nogawa C, Notazawa A, Ohmori F, Sarashina I, Suzuki M, Takagi R, Takahashi J, Takeuchi T, Yokoo N, Satoh N, Toyohara H, Miyashita T, Wada H, Samata T, Endo K, Nagasawa H, Asakawa S, Watabe S. The diversity of shell matrix proteins: genome-wide investigation of the pearl oyster, Pinctada fucata. Zoolog Sci. 2013 Oct;30(10):801-16.
●Bhuiyan SS, Kinoshita S, Wongwarangkana C, Asaduzzaman M, Asakawa S, Watabe S. Evolution of the myosin heavy chain gene MYH14 and its intronic microRNA miR-499: muscle-specific miR-499 expression persists in the absence of the ancestral host gene. BMC Evol Biol. 2013 Jul 6;13:142.
●Asaduzzaman M, Kinoshita S, Bhuiyan SS, Asakawa S, Watabe S. Stimulatory and inhibitory mechanisms of slow muscle-specific myosin heavy chain gene expression in fish: transient and transgenic analysis of torafugu MYH(M86-2) promoter in zebrafish embryos. Exp Cell Res. 2013 Apr 1;319(6):820-37.
●Zhang Hong, Hirose Yusuke, Yoshino Rintaro, Kinoshita Shigeharu, Saito Kazuyoshi, Tan Engkong, Suzuki Yutaka, Shimizu Atsushi, Okano Hideyuki, Kudoh Jun, Watabe Shugo, Asakawa Shuichi, Assessment of homozygosity levels in the mito-gynogenetic torafugu, (Takifugu rubripes) by genome-wide SNP analyses, AQUACULTURE, 380, 114-119,2013
●Igarashi Yoji, Doi Hiroyuki, Yamanoue Yusuke, Kinoshita Shigeharu, Ishibashi Toshiaki, Ushio Hideki, Asakawa Shuichi, Nishida, Mutsumi, Watabe Shugo, Molecular phylogenetic relationship of Tetraodon pufferfish based on mitochondrial DNA analysis, FISHERIES SCIENCE, 79, 243-250, 2013
●Asaduzzaman Md, Akolkar Dadasaheb B, Kinoshita Shigeharu, Watabe, Shugo, The expression of multiple myosin heavy chain genes during skeletal muscle development of torafugu Takifugu rubripes embryos and larvae, GENE 515, 144-154, 2013
●Nakayama Seiji, Suzuki Michio, Endo Hirotoshi, Iimura Kurin, Kinoshita Shigeharu, Watabe Shugo, Kogure Toshihiro, Nagasawa Hiromichi, Identification and characterization of a matrix protein (PPP-10) in the periostracum of the pearl oyster, Pinctada fucata, FEBS OPEN BIO, 3, 421-427, 2013
2012
●Engkong Tan, Chaninya Wongwarangkana, Shigeharu Kinoshita, Yutaka Suzuki, Kenshiro Oshima, Masahira Hattori, Toshinao Ineno, Koichi Tamaki, Akio Kera, Koji Muto, Takashi Yada, Shoji Kitamura, Shuichi Asakawa, and Shugo Watabe: Global gene expression analysis of gill tissues from normal and thermally selected strains of rainbow trout. Fish. Sci., in press.
●Nobuhiko Ojima, Miyuki Mekuchi, Toshinao Ineno, Koichi Tamaki, Akio Kera, Shigeharu Kinoshita, Shuichi Asakawa, and Shugo Watabe: Differential expression of heat-shock proteins in F2 offspring from F1 hybrids produced between thermally-selected and normal rainbow trout strains. Fish. Sci., in press.
●Takeshi Takeuchi, Takeshi Kawashima, Ryo Koyanagi, Fuki Gyoja, MakikoTanaka, Tetsuro Ikuta, Eiichi Shoguchi, Mayuki Fujiwara, Chuya Shinzato, Kanako Hisata, Manabu Fujie, Takeshi Usami, Kiyohito Nagai, Kaoru Maeyama, Kikuhiko Okamoto, Hideo Aoki, Takeshi Ishikawa, Tetsuji Masakoka, Atsushi Fujiwara, Kazuyoshi Endo, Hirotoshi Endo, Hiromichi Nagasawa, Shigeharu Kinoshita, Shuichi Asakawa, Shugo Watabe, and Nori Satoh: A draft genome of the pearl oyster Pinctada fucata to provide a platform for understanding bivalve biology. DNA Res., 19, 117-130 (2012).
●Ning Wang, Shigeharu Kinoshita, Naoko Nomura, Chihiro Riho, Kaoru Maeyama, Kiyohito Nagai, and Shugo Watabe: The mining of pearl formation genes in pearl oyster Pinctada fucata by cDNA suppression subtractive hybridization. Mar. Biotechnol., 14, 177-188 (2012).
2011
●Asaduzzaman M, Kinoshita S, Siddique BS, Asakawa S, Watabe S.: Multiple cis-elements in the 5'-flanking region of embryonic/larval fast-type of the myosin heavy chain gene of torafugu, MYH(M743-2), function in the transcriptional regulation of its expression. Gene. 2011, 489(1):41-54.
●Kinoshita S, Wang N, Inoue H, Maeyama K, Okamoto K, Nagai K, Kondo H, Hirono I, Asakawa S, Watabe S.: Deep sequencing of ESTs from nacreous and prismatic layer producing tissues and a screen for novel shell formation-related genes in the pearl oyster. PLoS One. 2011, 6(6):e21238.
●Matsuki E, Miyakawa Y, Asakawa S, Tsukada Y, Yamada T, Yokoyama K, Kudoh J, Ikeda Y, Okamoto S.: Identification of loss of p16 expression and upregulation of MDR-1 as genetic events resulting from two novel chromosomal translocations found in a plasmablastic lymphoma of the uterus. Clin Cancer Res. 2011, 17(8):2101-9.
●Shigeharu Kinoshita, Ning Wang, Haruka Inoue, Kaoru Maeyama, Kikuhiko Okamoto, Kiyohito Nagai, Hidehiro Kondo, Ikuo Hirono, Shuichi Asakawa, and Shugo Watabe: Deep sequencing of ESTs from nacreous and prismatic layer producing tissues and a screen for novel shell formation-related genes in the pearl oyster. PLoS One, 6, e21238 (2011).
●Shigeharu Kinoshita, Eriko Katsumi, Hiroshi Yamamoto, Kazuharu Takeuchi, and Shugo Watabe: Molecular and functional analyses of aspolin, a fish-specific protein extremely rich in aspartic acid. Mar. Biotechnol., 13, 517-526 (2011).
●Shigeharu Kinoshita, Bhuiyan Sharmin Siddique, Saltuk Bugrahan Ceyhun, Md. Asaduzzaman, Shuichi Asakawa, and Shugo Watabe: Species-specific expressional variation of fish MYH14, an ancient vertebrate myosin heavy chain gene orthologue. Fish. Sci. 77, 847-853 (2011).
●Md. Asaduzzaman, Shigeharu Kinoshita, and Shugo Watabe: Multiple cis-elements in the 5'-flanking region of embryonic/larval fast-type of the myosin heavy chain gene of torafugu, MYHm743-2, function in the regulation of its expression. Gene, 489, 41-54 (2011).
●Shinya Ohata, Ryo Aoki, Shigeharu Kinoshita, Masahiro Yamaguchi, Sachiko Tsuruoka-Kinoshita, Hideomi Tanaka, Hironori Wada, Shugo Watabe, Takashi Tsuboi, Ichiro Masai, and Hitoshi Okamoto. Dual roles of notch in regulation of apically restricted mitosis and apicobasal polarity of neuroepithelial cells. Neuron, 69, 215-230 (2011).
●Gen Kaneko, Satoshi Furukawa, Yohei Kurosu, Toshihiro Yamada, Hirohiko Takeshima, Mutsumi Nishida, Toru Mitsuboshi, Taro Otaka, Kunio Shirasu, Shigeharu Kinoshita, and Shugo Watabe: Primary structure of insulin-like growth factors and correlation between larval body size and accumulated mRNA levels of growth-related genes in torafugu Takifugu rubripes. J. Fish Biol., 79, 854-874 (2011).
●Lubna Yasmin*, Shigeharu Kinoshita*, Md. Asaduzzaman, Dadasaheb B. Akolkar, Daisuke Ikeda, Yosuke Ono, and Shugo Watabe: A 5’-flanking region of embryonic-type myosin heavy chain gene, MYHM743-2, from torafugu Takifugu rubripes regulates developmental muscle-specific expression. Comp. Biochem. Physiol., D6, 76-81 (2011). *These authors equally contributed to this work.
●Md. Shaheed Reza, Shigeharu Kinoshita, Satoshi Furukawa, Toshiaki Mochizuki, and Shugo Watabe: "Microsatellite and mitochondrial DNA analyses reveal no genetic difference between two pufferfish species torafugu Takifugu rubripes and karasu T. chinesis. " Fish. Sci. (in press).
●Shigeharu Kinoshita, Eriko Katsumi, Hiroshi Yamamoto, Kazuharu Takeuchi, and Shugo Watabe: "Molecular and functional analyses of aspolin, a fish-specific protein extremely rich in aspartic acid. " Marine Biotechnol. (in press).
●Lubna Yasmin, Shigeharu Kinoshita, Dadasaheb B. Acolkar, Daisuke Ikeda, Yosuke Ono, and Shugo Watabe: "A 5'-flanking region of embryonic-type myosin heavy chain gene, MYHM743, from torafugu(Takifugu rubripes) regulates developmental muscle-specific expression. " Comp. Biochem. Physiol. D. 6, 76-81(2011).
2010
●Yoshihiro Ochiai, Hideo Ozawa, Ming Chen Huang, and Shugo Watabe: "Characterization of two tropomyosin isoforms from the fast skeletal muscle of bluefin tuna Thunnus thynnus orientalis." Arch. Biochem. Biophys., 502, 96-103(2010).
●Hideo Ozawa, Shugo Watabe, and Yoshihiro Ochiai: "Thermostability of striated and smooth adductor muscle tropomyosin from Yesso scallop Mizuhopecten yessoensis." J.Biochem., 147, 823-832(2010).
●落合芳博、渡辺良明、内田直行、小澤秀夫、渡部終五: "イワシクジラ骨格筋ミオグロビンの生化学的および熱力学的性状. " 日水誌, ７６, 686-694 (2010).
●Park JY, Takagi Y, Yamatani M, Honda K, Asakawa S, Shimizu N, Omasa T, Ohtake H: "Identification and analysis of specific chromosomal region adjacent to exogenous Dhfr-amplified region in Chinese hamster ovary cell genome. " J. Biosci. Bioeng., 109(5), 504-511(2010)
●Koyama T, Asakawa S, Katagiri T, Shimizu A, Fagutao FF, Mavichak R, Santos MD, Fuji K, Sakamoto T, Kitakado T, Kondo H, Shimizu N, Aoki T, Hirono I: "Hyper-expansion of large DNA segments in the genome of kuruma shrimp, Marsupenaeus japonicus." BMC Genomics., 11, 141(2010)
●Tsuda S, Kitagawa T, Takashima S, Asakawa S, Shimizu N, Mitani H, Shima A, Tsutsumi M, Hori H, Naruse K, Ishikawa Y, Takeda H: "FAK-mediated extracellular signals are essential for interkinetic nuclear migration and planar divisions in the neuroepithelium. " J. Cell Sci., 123, 484-496(2010)
●Yosuke Ono, Shigeharu Kinoshita, Daisuke Ikeda, and Shugo Watabe: "Early development of medaka Oryzias latipes muscles as revealed by transgenic approaches using embryonic and larval types of myosin heavy chain genes." Dev. Dyn., 239, 1807-1817 (2010).
●Atsushi Fukui, Munehiro Takami, Takao Tsuchiya, Keijiro Sezaki, Yoji Igarashi, Shigeharu Kinoshita, and Shugo Watabe: Pelagic eggs and larvae of Coelorinchus kishinouyei (Gadiformes: Macrouridae) collected from Suruga Bay, Japan. Ichthyol. Res., 57, 169-179(2010).
●Aung Kyaw Swar Oo, Gen Kaneko, Makoto Hirayama, Shigeharu Kinoshita, and Shugo Watabe: "Identification of differentially expressed genes induced by calorie restriction in Brachionus plicatilis. " J. Comp. Physiol. B, 180, 105-118(2010).
●Dadasahab B Akolkar, Shigeharu Kinoshita, Lubna Yasmin, Yosuke Ono, Daisuke Ikeda, Hiroko Yamaguchi, Misako Nakaya, Orhan Erdogan, and Shugo Watabe: "Fibre-type-specific expression patterns of myosin heavy chain genes in adult torafugu Takifugu rubripes muscles. " J. Exp. Biol., 213, 137-145(2010).
2009
●Sato N, Amino T, Koyabashi K, Asakawa S, Ishiguro T, Tsunemi T, Takahashi M, Matsuura T, Flanigan KM, Iwasaki S, Ishino F, Saito Y, Murayama S, Yoshida M, Hashizume Y, Takahashi Y, Tsuji S, Shimizu N, Toda T, Ishikawa K, Mizusawa H: "Spinocerebellar ataxia type 31 is associated with "inserted" penta-nucleotide repeats containing (TGGAA)n." Am J Hum Genet., 85(5), 544-557(2009)
●Asakawa S, Hattori N, Shimizu A, Shimizu Y, Minoshima S, Mizuno Y, Shimizu N: "Analysis of eighteen deletion breakpoints in the parkin gene." Biochem. Biophys. Res. Commun., 389(1), 181-186(2009)
●Nakamura S, Kurokawa H, Asakawa S, Shimizu N, Tanaka M: "Two distinct types of theca cells in the medaka gonad: germ cell-dependent maintenance of cyp19 al-expressing theca cells." Dev. Dyn., 238(10), 2652-2657(2009)
●Maruyama S, Cheng J, Shingaki S, Tamura T, Asakawa S, Minoshimia S, Shimizu Y, Shimizu N, Saku T: "Establishiment and characterization of pleomorphic adenoma cell systems: an in-vitro demonstration of carcinomas arising secondarily from adenomas in the salivary gland. " BMC Cancer., 9, 247(2009)
●Hashimoto H, Miyamoto R, Watababe N, Shiba D, Ozato K, Inoue C, Kubo Y, Koga A, Jindo T, Narita T, Naruse K, Ohishi K, Nogata K, Shin-I T, Asakawa S, Shimizu N, Miyamoto T, Mochizuki T, Yokoyama T, Hori H, Takeda H, Kohara Y, Wakamatsu Y: "Polycystic kidney disease in the medaka (Oryzias latipes) pc mutant caused by a mutation in the Gli Similar3(glis3)gene." PLoS One, 4(7), , e6299(2009).
●Omasa T, Cao Y, Park JY, Takagi Y, Kimura S, Yano H, Honda K, Asakawa S, Shimizu N, Ohtake H: "Bacterial artificial chromosome library for genome-wide analysis of Chinese hamster ovary cells." Biotechnol. Bioeng., 104(5), 544-557(2009)
●Ning Wang, Shigeharu Kinoshita, Chihiro Riho, Kaoru Maeyama, Kiyohito Nagai, and Shugo Watabe: "Quantitative expression analysis of nacreous shell matrix protein genes in the process of pearl biogenesis." Comp. Biochem. Physiol. Part B, 154, 346-350 (2009).
●Shigeharu Kinoshita,Sayaka Isu, Gen Kaneko, Hiroshi Yamada,Takeya Hara, Yasuo Itoh, and Shugo Watabe: "The occurrence of eukaryotic type III glutamine synthetase in the marine diatom Chaetoceros compressum." Marine Genomics, 2, 103-111 (2009).
●Hideo Ozawa, Shugo Watabe, and Yoshihiro Ochiai: "Thermal stability of the synthetic peptides with the sequence of fish fast skeletal muscle tropomyosin." Fish. Sci., 75, 1029-1037 (2009).
●Yoshihiro Ochiai, Nobuhiko Ueki, and Shugo Watabe: "Effects of point mutations on the structural stability of tuna myoglobin. " Comp. Biochem. Physiol. Part B, 153, 223-228 (2009)
●Shinya Ohata, Shigeharu Kinoshita, Ryo Aoki, Hideomi Tanaka, Hironori Wada, Sachiko Tsuruoka-Kinoshita, Takashi Tsuboi, Shugo Watabe, and Hitoshi Okamoto: "Neuroepithelial cells require fucosylated glycans to guide the migration of vagus motor neuron progenitors in the developing zebrafish hindbrain. " Development, 136, 1653-1663 (2009).
2008
●Kazuaki Masuda, Guo Xiao Feng, Noboru Uryu,Toshihiko Hagiwara, and Shugo Watabe: "Isolation of marine yeasts collected from the Pacific Ocean having a high production ofγ-aminobutyric acid." Biosci. Biotechnol. Biochem., 72, 3265-3272 (2008).
●Mohammed Anwar Hossain, Daisuke Ikeda, Akira Nomura, Hideto Fukushima, and Shugo Watabe: "cDNA cloning and complete primary structures of myosin heavy chains from brushtooth lizardfish(Saurida undosquamis) and wanieso lizardfish(S. wanieso) fast skeletal muscles." Fish. Sci., 74, 921-934 (2008).
●Md. Shaheed Reza, Satoshi Furukawa, Toshiaki Mochizuki, Hisashi Matsumura, and Shugo Watabe: "Genetic comparison between torafugu Takifugu rubripes and its closely related species karasu T. chinensis." Fish. Sci., 74, 743-754 (2008).
●Miho Kusaka, Daisuke Ikeda, Daisuke Funabara, David J. Hartshorne, and Shugo Watabe: "The occurrence of tissue-specific twitchin isoforms in the mussel Mytilus galloprovincialis." Fish. Sci., 74, 677-686 (2008).
●Makoto Hirayama, Md. Mazmul Ahsan, Hiroshi Mitani, and Shugo Watabe: "CYR61 is a novel gene associated with temperature-dependent changes in fish metabolism as revealed by cDNA microarray analysis on a medaka Oryzias latipes cell line." J. Cell. Biochem., 104, 1297-1310 (2008).
●Atsushi Fukui, Takao Tsuchiya, Keijiro Sezaki, and Shugo Watabe: "Pelagic eggs and larvae of Coryphaenoides marginatus(Cadiformes: Macrouridae) collected from Suruga Bay, Japan." Ichthyol. Res., 55, 284-293 (2008).
●大村裕治、渡辺真由、木宮隆、山下由美子、岡崎恵美子、山澤正勝、渡部終五: "イカ乾製品の褐変を促進するスルメイカ水溶性成分. " 日水誌, 74, 66-74 (2008).
●Sung Ho Yoon, Yasuo Itoh, Gen Kaneko, Makiko Nakaniwa, Masataka Ohta, and Shugo Watabe: "Molecular characterization of Japanese sillago vitellogenin and changes in its expression levels on exposure to 17β-estradiol and 4-tert-octylphenol." Marine Biotechnol., 10, 19-30 (2008).
●Sun-Yong Wang, Yan Tao, Chun-Shi-Liang Hideto Fukushima, and Shugo Watabe: "cDNA cloning and characterization of temperature-acclimation-associated light meromyosins from grass carp fast skeletal muscle." Comp. Biochem. Physiol. B, 149, 378-387 (2008).
●Chun-Shi Liang, Daisuke Ikeda, Shigeharu Kinoshita, Atsushi Shimizu, Takashi Sasaki, Shuichi Asakawa, Nobuyoshi Shimizu, and Shugo Watabe: " Myocyte enhancer factor 2 regulates expression of medaka Oryzias latipes fast skelatal myosin heavy chain genes in a temperature-dependent manner." Gene, 407, 42-53(2008).
2007
●Daisuke Ikeda, Yosuke Ono, Phill Snell, Yvonne J. K. Edwards, Greg Elger, and Shugo Watabe: "Divergent evolution of the myosin heavy chain gene family in fish and tetrapods; evidence from comparative genomic analysis." Physiol. Genomics, 32, 1-15(2007).
●Ryohei Ueno, Volker A. R. Huss, Naoto Urano, and Shugo Watabe: "Direct evidence for redundant segmental replacement between multiple 18S rRNA genes in a single Prototheca strain." Microbiology, 153, 3879-3893(2007).
●Hidehiro Kondo, Ryohei Misaki, Laurent German, and Shugo Watabe: "Ligand-dependent transcriptional activities of four torafugu pufferfish Takifugu rubripes peroxisome proliferatores-activated receptors." Gen. Comp. Endocrinol., 154, 120-127(2007).
●Daisuke Funabara, Chieko Hamamoto, Koji Yamamoto, Akinori Inoue, Miki Ueda, Rika Osawa, Satoshi Kanoh, David J. Hartshorne, Suechika Suzuki, and Shugo Watabe: "Unphosphorylated twitchin forms a complex with actin and myosin that may contribute to tension maintenance in catch." J. Exp. Biol., 210, 4399-4410(2007).
●Hidehiro Kondo, Ryohei Harano, and Shugo Watabe: "cDNA cloning of goldfish Hsp27 and its chaperone activity." Fish. Sci., 73, 950-957(2007).
●Jeen Hee Lee, Hidehiro Kondo, Shigeru Sato, Seiji Akimoto, Toshio Saito, Masaaki Kodama, and Shugo Watabe: "Identification of novel genes related to tetrodotoxin in pufferfish." Toxicon, 49, 939-953 (2007).
●Hideto Fukushima, Emiko Okazaki, Yutaka Fukuda, and Shugo Watabe: "Rheological properties of fish meat pastes from walleye pollack, white croaker and threadfin bream in modest temperatures below 30℃ adaptable for shaping of surimi-based products." J. Food Engineer., 81, 492-499(2007).
●Chun-Shi Liang, Atsushi Kobiyama, Atsushi Shimizu, Takashi Sasaki, Shuichi Asakawa, Nobuyoshi Shimizu, and Shugo Watabe: "Fast skeletal muscle myosin heavy chain gene cluster of medaka Oryzias latipes enrolled in temperature adaptation." Physiol. Genomics, 29, 201-214 (2007).
●Shiro Itoi, Koki Ikeguchi, Masaki Kaneniwa, Ryuji Kuwahara, Ichiro Ohara, Noriko Ishida, Michiaki Yamashita, and Shugo Watabe: "Qualitative and quantitative changes of F0F1-ATPase in Japanese flounder and red seabream associated with rearing temperatures." Fish. Sci., 73, 429-439 (2007).
●Yan Tao, Makito Kobayashi, Hideto Fukushima, and Shugo Watabe: "Changes in dynamic viscoelastic properties of grass carp fast skeletal myosin induced by seasonal acclimatization." Fish. Sci., 73, 189-196 (2007).
●Yuji Omura, Masakatsu Yamazawa, Yumiko Yamashita, Emiko Okazaki, and Shugo Wababe: "Relationship between post-morten changes and brouning of boild, dried and seasoned product made from Japanese common squid(Tedarodes pacificus) mantel mascle." J. Food Sci., 72, C44-C0496 (2007).
2006
●Yosuke Ono, Chun-Shi Liang, Daisuke Ikeda and Shugo Watabe: "cDNA cloning of myosin heavy chain genes from medaka Oryzias latipes embryos and larvae and their expression patterns during development." Dev. Dyn., 235, 3092-3101 (2006).
●Hidehiro Kondo and Shugo Watabe: "Growth promoting effects of carp serum components on goldfish culture cells." Fish. Sci., 72, 884-888 (2006).
●Makito Kobayashi, Hiroshi Ishibashi, Toshihisa Moriwaki, Tomohiko Koshiishi, Satoshi Ogawa, Takeru Matsumoto, Koji Arizono, and Shugo Watabe: "Development of a low-estrogen fish diet for in vivo endocrine disrupter test." Environmental Sci., 13, 125-136 (2006).
●Makito Kobayashi, Tetsuro Morita, Koki Ikeguchi, Goro Yoshizaki, Takeo Suzuki, and Shugo Watabe: "In vivo biological activity of recombinant goldfish gonadtropins produced by baculovirus in silkworm larvae." Aquaculture, 256, 433-442 (2006).
●Yoshie Satoh, Misako Nakaya, Yoshihiro Ochiai, and Shugo Watabe: "Enzymatic and structural properties of white croaker fast skeletal myosins in comparison of that from walleye pollack." Fish. Sci., 72, 646-655 (2006).
●Md. Nazmul Ahsan, Hitoshi Aoki, and Shugo Watabe: "Characterization of cDNA clones encoding two distinct cathepsins with restricted expression pattern in a marine pelagic fish." Mol. Biol. Rep., 33, 233-241 (2006)
●Koki Ikeguchi, Toshinao Ineno, Shiro Itoi, Hidehiro Kondo, Shigeharu Kinoshita, and Shugo Watabe: "Specific gene expression during embryonic development of rainbow trout Oncorhynchus mykiss from high-temperature-tolerant strain." Marine Biotechnol. 8, 178-188 (2006).
●Atsushi Kobiyama, Makoto Hirayama, Maiko Muramatsu, Kiyoshi Kikuchi, and Shugo Watabe: "Isolation and characterization of the 5’-flanking region of carp fast skeletal myosin heavy chain genes." Gene, 372, 82-91 (2006).
●Makoto Hirayama, Hiroshi Mitani, and Shugo Watabe: "Temperature-dependent growth rates and gene expression patterns of medaka Oryzias latipes cell line from different populations." J. Comp. Physiol. Part B, 176, 311-320 (2006).
●Seiji Akimoto, Shiro Itoi, Keijiro Sezaki, Philippe Borsa, and Shugo Watabe: "Identification of alfonsino, Beryx mollis and B. splendens collected in Japan, based on the mitochondrial cytochrome b gene, and their comparison with those collected in New Caledonia." Fish. Sci., 72, 202-207 (2006).
●Toshio Saito, Takahito Kohama, Kenjiro Ui, and Shugo Watabe: "Distribution of tetrodotoxin in the xanthid crab (atergatis floridus) collccted in the coastal waters of Kanagawa and Wakayama prefectures." Comp. Biochem. Physiol. Part D, 1, 158-162 (2006).
●Shoichiro Ishizaki, Yasuhiro Yokoyama, Naomasa Oshiro, Natsuko Teruya, Yuji Nagashima, Kazuo Shiomi, and Shugo Watabe: "Molecular identification of pufferfish species using PCR amplification and restriction analysis of a segment of the 16S rRNA gene. Comp. Biochem. Physiol. Part D, 1, 139-144 (2006).
2005
●Yoshiaki Nihei, Daisuke Ikeda, Yosuke Ono, Atsushi Kobiyama, Satoshi Ohara, Nicholas J. Cole, Ian A. Johnston, and Shugo Watabe: "Molecular cloning and mRNA expression analysis of carp embryonic, slow and cardiac myosin heavy chain isoforms." J. Exp. Biol., 209, 188-198 (2005).
●Hideto Fukushima, Yoshie Satoh, Sung Ho Yoon, Marie Togashi, Misako Nakaya, and Shugo Watabe: "Rheological properties of fast skeletal myosin rod and light meromyosin from walleye pollack and white croaker: contribution of myosin fragments to thermal gel formation." J. Agric. Food Chem., 53, 9193-9198 (2005).
●Gen Kaneko, Tatsuki Yoshinaga, Yoshiko Yanagawa, Shigeharu Kinoshita, Katsumi Tsukamoto, and Shugo Watabe: "Molecular characterization of Mn-superoxide dismutase and gene expression studies in dietary restricted Brachionus plicatilis rotifers." Hydrobiologia, 546, 117-123 (2005).
●Tatsuki Yoshinaga, Gen Kaneko, Shigeharu Kinoshita, Satoshi Furukawa, Katsumi Tsukamoto, and Shugo Watabe: "Insulin-like growth factor signaling pathway involved in regulating longevity of rotifers." Hydrobiologia, 546,347-352 (2005).
●Jorge M. O. Fernandes, Matthew G. Mackenzie, Greg Elgar, Yuzuru Suzuki, Shugo Watabe, James R. Kinghorn, and Ian A. Johnston: "A genomic approach to reveal novel genes associated with myotube formation in the model teleost, Takifugu rubripes." Physiol. Genomics, 22, 327-338 (2005).
●Toshinao Ineno, Shuuji Tsuchida, Mikio Kanda, and Shugo Watabe: "High temperature tolerance of rainbow trout Oncorhyncus mykiss selected by high temperature breeding." Fish. Sci., 71, 767-775 (2005).
●Shiro Itoi, Misako Nakaya, Gen Kaneko, Hidehiro Kondo, Keijiro Sezaki, and Shugo Watabe: "Rapid identification of eels Anguilla japnonica and Anguilla anguilla by PCR with SNP-based specific probes." Fish. Sci., 71, 1356-1364 (2005).
●Nobuhiko Ueki, Chau-Jen Chow, and Yoshihiro Ochiai: "Characterization of bullet tuna myoglobin with reference to the thermostability-structure relationship." J. Agric. Food Chem., 53, 4968-4975 (2005).
●Makiko Nakaniwa, Makoto Hirayama, Atsushi Shimizu, Takashi Sasaki, Shuichi Asakawa, Nobuyoshi Shimizu, and Shugo Watabe: "Genomic sequences of two types of medaka hemopexin-like protein Wap65, and their expression profiles in embryos." J. Exp. Biol., 208, 1915-1925 (2005).
●Md. Nazmul Ahsan, Hitoshi Aoki, and Shugo Watabe: "Overexpression in Escherichia coli and functional reconstitution of anchovy trypsinogen from the bacterial inclusion body." Mol. Biotechnol., 30, 193-205 (2005).
●Shiro Itoi, Ryohei Misaki, Makoto Hirayama, Makiko Nakaniwa, Chun-Shi Liang, Hidehiro Kondo, and Shugo Watabe: "Identification of three isoforms for mitochondrial adenine nucleotide translocator in Takifugu rubripes." Mitochondrion, 5, 162-172 (2005).
●Keijiro Sezaki, Shiro Itoi, and Shugo Watabe: "Simple method for identification of eels Anguilla japnonica and A.anguilla by PCR with species-specific probes" Fish. Sci., 71, 414-421 (2005).
●Maiko Muramatsu-Uno, Kiyoshi Kikuchi, Hiroaki Suetake, and Shugo Watabe: "The complete nucleotide sequence of the carp myosin heavy chain gene." Gene, 349, 143-151 (2005)
●Hidehiro Kondo, Ryouhei Misaki, Koichiro Morinaga, Misako Nakaya, and Shugo Watabe: "Characterization of fish apolipoprotein multigene family in Takifugu rubripes." Gene, 346, 257-266 (2005).
●舩津保浩、 深見克哉、近藤秀裕、渡部終五 "マルソウダ魚醤油のもろみから分離したStaphylococcus nepalensis による黒作りイカ塩辛の臭気の改良." 日水誌, 71, 611-617 (2005).
●秋元清治、瀬崎啓次郎、三谷勇、渡部終五 "１６S rRNA遺伝子によるキンメダイ属卵・仔魚の種判別および伊豆諸島周辺海域における卵仔魚の分布様式." 日水誌, 71, 205-211 (2005).
●大村裕治、岡崎恵美子、山下由美子、山澤正勝、渡部終五 "イカ乾製品の褐変に及ぼすリボースの影響. " 日水誌, 71, 198-204 (2005).
●Nobuhiko Ojima, Michiaki Yamashita, and Shugo Watabe: "Comparative expression analysis of two paralogous Hsp70 genes in rainbow trout cells exposed to heat stress." Biochim. Biophys. Acta, 1681, 99-106 (2005).
●Nobuhiko Ojima, Michiaki Yamashita, and Shugo Watabe: "Quantitative mRNA expression profiling of heat-shock proteins families in rainbow trout cells." Biochem. Biophys. Res. Commun., 329, 51-57 (2005).
●Yan Tao, Makito Kobayashi, Hideto Fukushima, and Shugo Watabe: "Changes in enzymatic and structural properties of grass carp fast skeletal myosin induced by the laboratory-conditioned thermal acclimation and seasonal acclimatization." Fish. Sci., 71, 195-204 (2005).
●Hiroshi Oikawa, Masataka Satomi, Shugo Watabe, and Yutaka Yano: "Accumulation and depuration of paralytic shellfish poisoning toxins in the shore crab Telmessus acutidens by the feeding of toxic and non-toxic mussels under laboratory-controlled conditions." Toxicon, 45, 163-169 (2005).
●Ming-Chih Huang and Yoshihiro Ochiai: "Fish fast skeletal muscle tropomyosins show species-specific thermal stability" Comp. Biochem. Physiol. PartB, 141, 461-471 (2005).
●Nobuhiko Ueki and Yoshihiro Ochiai: "Structural stabilities of recombinant scombridae fish myoglobins" Biosci. Biotechnol. Biochem., 69, 1935-1943 (2005).
2004
●Daisuke Ikeda, Melody S. Clark, Chun-Shi Liang, Philip Snell, Yvonne J. K. Edwards, and Shugo Watabe: "Genomic structural analysis of the pufferfish (Takifugu rubripes) skeletal myosin heavy chain genes." Marine Biotechnol., 6, S462-S467 (2004).
●Rowshan Ara Begum, Kohei Tsuchida, Toshiyuki Yamaguchi, Matsumi Nishida, and Shugo Watabe: "Complete mitochondrial genome of the sessile barnacle Tetraclita japonica." Marine Biotechnol., 6, S318-S324 (2004).
●Tetsuro Morita, Goro Yoshizaki, Makito Kobayashi, Shugo Watabe, and Toshio Takeuchi: "Fish eggs as bioreactors: the production of bioactive luteinizing hormone in transgenic trout embryos." Transgenic Res., 13, 551-557 (2004).
●Yan Tao, Makito Kobayashi, Chun-Shi Liang, Takashi Okamoto, and Shugo Watabe: "Temperature-dependent expression patterns of grass carp fast skeletal myosin heavy chain genes." Comp. Biochem. Physiol. Part B, 139, 649-656 (2004)
●Takeru Matsumoto, Makito Kobayashi, Toshihisa Moriwaki, Shin'ichiro Kawai, and Shugo Watabe: "Survey of estrogenic activity in fish feed by yeast estrogen-screen assay." Comp. Biochem. Physiol. Part C, 139, 147-152 (2004).
●Hidehiro Kondo, Ryohei Harano, Misako Nakaya, and Shugo Watabe: "Enhanced HSP30 and HSP70 expression related to endothermic reaction in goldfish fibroblasts. " Cell Stress Chaperons, 9, 350-358 (2004).
●Nobuhiko Ueki and Yoshihiro Ochiai: "Primary structure and thermostability of bigeye tuna myoglobin in relation to those of other scombridae fish." Fish. Sci., 70, 875-884 (2004).
●Nicholas J. Cole, Thomas E. Hall, Christopher I. Martin, Mark A. Chapman, Atsushi Kobiyama, Yoshiaki Nihei, Shugo Watabe, and Ian A. Johnston: "Temperature and the expression of myogenic regulatory factors (MRFs) and myosin heavy chain isoforms during embryogenesis in the common carp Cyprinus carpio." J. Exp. Biol., 207, 4239-4248 (2004).
●Katsuya Fukami, Masataka Satomi, Yasuhiro Funatsu, Ken-ichi Kawasaki, and Shugo Watabe: "Characterization and distribution of Staphylococcus sp. implicated for improvement of fish sauce odor." Fish. Sci., 70, 916-923 (2004).
●Hidehiro Kondo and Shugo Watabe: "Warm temperature-dependent enhancement of cell proliferation in association with gene expression of type I collagen and HSP70 in primary cultured goldfish cells." Comp. Biochem. Physiol., 138A, 221-228 (2004).
●Chau-Jen Chow, Yoshihiro Ochiai, and Shugo Watabe: "Effect of frozen temperature on autoxidation and aggregation of bluefin tuna myoglobin in solution." J. Food Biochem., 28, 123-134 (2004).
●Ming-Chih Huang, Yoshihiro Ochiai, and Shugo Watabe: "Structural and thermodynamic characterization of tropomyosin from fast skeletal muscle of bluefin tuna Thunnus thynnus." Fish. Sci., 70, 667-674 (2004).
●Hiroshi Oikawa, Tsuneo Fujita, Ken Saito, Shugo Watabe, Masataka Satomi, and Yutaka Yano: "Comparison of paralytic shellfish poisoning toxin between carnivorous crabs (Telmessus acutidens and Charybdis japonicus) and their prey mussel (Mytilus galloprovincialis) in an inshore food chain." Toxicon, 43, 713-719 (2004).
●Hitoshi Aoki, Md. Nazmul Ahsan, Kenji Matsuo, Toshihiko Hagiwara, and Shugo Watabe: "Tenderization of beef by proteases partially purified from processing wastes of northern shrimp Pandalus borealis." Int. J. Food Sci. Technol., 39, 471-480 (2004).
●Satoshi Furukawa, Hirohiko Takeshima, Taro Otaka, Toru Mitsuboshi, Kunio Shirasu, Daisuke Ikeda, Gen Kaneko, Mutsumi Nishida, and Shugo Watabe: "Isolation of microsatellite markers by in silico screening implicated for genetic linkage mapping in Japanese pufferfish Takifugu rubripes." Fish. Sci., 70, 620-627 (2004).
●Rowshan Ara Begum, Toshiyuki Yamaguchi, and Shugo Watabe: "Molecular phylogeny of thoracican barnacles based on the mitochondrial 12S and 16S rRNA genes." Sessile Organisms, 21, 47-54 (2004).
●大村裕治、岡崎恵美子、山下由美子、山澤正勝、渡部終五 "イカ乾製品の褐変に及ぼすリボースの影響." 日水誌, 70, 187-193 (2004).
●Makoto Hirayama, Atsushi Kobiyama, Shigeharu Kinoshita, and Shugo Watabe: "The occurrence of two types of hemopexin-like protein in medaka and difference in thier affinity to heme. " J. Exp. Biol., 207, 1387-1398 (2004).
●Tatsuki Yoshinaga, Yuki Minegishi, Inneke F.M.Rumengan, Gen Kaneko, Satoshi Furukawa, Yoshiko Yanagawa, Katsumi Tsukamoto, and Shugo Watabe: "Molecular phylogeny of the rotifers with two Indonesian Brachionus lineages." Coastal Marine Science, 29, 45-56 (2004).
●Takuya Toramoto, Daisuke Ikeda, Yoshihiro Ochiai, Shinsei Minoshima, Nobuyuki Shimizu, and Shugo Watabe: "Multiple gene organaization of pufferfish Fugu rubripes tropomyosin isoforms and tissue distribution of their transcripts." Gene, 331, 41-51 (2004).
●Katsuya Fukami, Yasuhiro Funatsu, Ken-ichi Kawasaki, and Shugo Watabe: "Improvement of fish sauce odor by treatment with bacteria isolated from the fish sauce mush (moromi) made from frigate mackerel. " J. Food Sci., 69, 45-49 (2004).
●Hitoshi Aoki, Md. Nazmul Ahsan, and Shugo Watabe: "Molecular and enzymatic properties of a cathepsin L-like proteinase with distinct substrate specificity from northern shrimp (Pandalus borealis)." J. Comp. Physiol. PartB, 174, 59-69 (2004).
●Nobuhiko Ueki, Chau-Jen Chow, and Yoshihiro Ochiai: "Characterization of bullet tuna myoglobin with reference to the thermostability-structure relationship." J. Agric. Food Chem., 53, 4968-4975 (2005)．
2003
●Melody S. Clark, Yvonne J. K. Edwards, Dan Peterson, Sandra Clifton, Amanda J. Thompson, Masahide Sasaki, Yutaka Suzuki, Kiyoshi Kikuchi, Shugo Watabe, Koichi Kawakami, Sumio Sugano, Greg Elgar, and Stephen L. Johnson: "Improved genome annotation in Fugu using EST and transcription analysis (running title Fugu ESTs). " Genome Res., 13, 2747-2753 (2003).
●Yoshihiro Ochiai and Shugo Watabe: "Identification of fish species of dried fish products by immunostaining using anti-myosin light chain antiserum." Food Res. Internatl., 36, 1029-1035 (2003).
●Hitoshi Aoki, Md. Nazmul Ahsan, and Shugo Watabe: "Heterologous expression in Pichia pastoris and single step purification of a cysteine proteinase from northern shrimp." Prot. Expr. Purif. 31, 213-221 (2003).
●Yoshihiro Ochiai, Huang Ming-Chih, Hideto Fukushima, and Shugo Watabe: "cDNA cloning and thermodynamic properties of tropomyosin from walleye pollack Theragra chalcogramma fast skeletal muscle." Fish. Sci., 69, 1033-1041 (2003).
●Daisuke Funabara, Shugo Watabe, Susan U. Mooers, Srinivasa Narayan, Csilla Dudas, David J. Hartshorne, Marion J. Siegman, and Thomas M. Butler: "Twitchin from molluscan catch muscle: primary structure and relationship between site-specific phosphorylation and mechanical function." J. Biol. Chem., 278, 29308-29316 (2003).
●Hideto Fukushima, Yoshie Satoh, Misako Nakaya, Shoichiro Ishizaki, and Shugo Watabe: "Thermal effects on fast skeletal myosins from walleye pollack, white croaker and rabbit in relation to gel formation." J. Food Sci., 68, 1573-1577 (2003).
●Hideto Fukushima, Sung Ho Yoon, and Shugo Watabe: "Differences in polymer formation through disulfide bonding of recombinant light meromyosin. " J. Agric. Food Sci., 51, 4089-4095 (2003).
●Hitoshi Aoki, Md. Nazmul Ahsan, and Shugo Watabe: "Molecular cloning and functional characterization of crustapain. A distinct cysteine proteinase with unique substrate specificity from northern shrimp Pandalus borealis." J. Biochem., 133, 799-810 (2003).
●Daisuke Ikeda, Takuya Toramoto, Yoshihiro Ochiai, Hiroaki Suetake, Yuzuru Suzuki, Shinsei Minoshima, Nobuyoshi Shimizu, and Shugo Watabe: "Identification of novel tropomyosin 1 genes of pufferfish (Fugu rubripes) on genomic sequences and tissue distribution of their transcripts." Mol. Biol. Rep., 30, 83-90 (2003).
●Yutaka Kariya, Shugo Watabe, Hideo Mochizuki, Kyoko Imai, Hiroshi Kikuchi, Kiyoshi Suzuki, Mamoru Kyogashima, and Tadashi Ishii: "Modification of di- and tetrasaccharides from shark cartlige keratan sulphate by refined anhydromethanolic hydorchloric acid-treatments and evaluation of their specific desulphation." Carbohydrate Res., 338, 1133-1138 (2003).
●Hitoshi Aoki, Md. Nazmul Ahsan, and Shugo Watabe: "Molecular cloning and characterization of cathepsin B from the hepatopancreas of northern shrimp Pandalus borealis. " Comp. Biochem. Physiol., 134 (4), 681-694 (2003).
●Hitoshi Aoki, Md. Nazmul Ahsan, Kenji Matsuo, Toshihiko Hagiwara, and Shugo Watabe: "Purification and characterization of collagenolytic proteases from the hepatopancreas of northern shrimp (Pandalus eous). " J. Agric. Food Chem., 51 (3), 777-783 (2003).
●Shiro Itoi, Shigeharu Kinoshita, Kiyoshi Kikuchi, and Shugo Watabe: "Coordinate expression of mitochondrial proteins encoded by mitochondrial and nuclear genes of carp in association with temperature changes. " Am. J. Physiol. Regul. Integr. Comp. Physiol., 284, R153-R163 (2003) .
2002
●Seiji Akimoto, Shigeharu Kinoshita, Keijiro Sezaki, Isamu Mitani, and Shugo Watabe: "Identification of alfonsino and related fish species belonging to the genus Beryx with mitochondrial 16S rRNA gene and its application to field survey on their pelagic eggs." Fisheries Sci., 68(6), 1242-1249 (2002).
●Gen Kaneko, Shigeharu Kinoshita, Tatsuki Yoshinaga, Katsumi Tsukamoto, and Shugo Watabe: "Changes in expresssion patterns of stress protein genes during population growth of the rotifer Brachionus plicatilis." Fisheries Sci., 68(6), 1317-1323 (2002).
●Marie Togashi, Makoto Kakinuma, Misako Nakaya, Tatsuo Ooi, and Shugo Watabe: "Thermodynamic properties of walleye pollack myosin and light meromyosin." J Agric. Food Chem., 50(1), 4803-4811 (2002).
●Chie Yoneda, Chinatsu Kasamatsu, Keiko Hatae, and Shugo Watabe: "Changes in taste and textural properties of foot part from the cockle (Fulvia mutica) by cooking and during storage. " Fisheries Sci., 68(5), 1138-1144 (2002).
●Takeru Matsumoto, Makoto Kobayashi, Yoshiaki Nihei, Toyoji Kaneko, Hruhisa Fukada, Kaori Hirano, Akihiko Hara, and Shugo Watabe: "Plasma vitellogenin levels in male common carp Cyprinus carpio and crucian carp Carassius cuvieri of lake Kasumigaura." Fisheries Sci., 68(5), 1055-1066 (2002).
●Shun-ichi Wada, Sachi SriKantha, Takahiro Yamashita, Shigeki Matsunaga, Nobuhiro Fusetani, and Shugo Watabe: "Accumulation of H+ in the vacuoles induced by a marine peptide toxin, theonellamide F, in rat embryonic 3Y1 fibroblast. " Marine Biotech., 4, 571-582 (2002).
2001
●Yoshihiro Ochiai, Loan Ochiai, Kanehisa Hashimoto, and Shugo Watabe: "Quantitative estimation of dark muscle content in the mackerel meat paste and its products using antisera against myosin light chains." J. Food Sci., 66 (9), 1301-1305 (2001).
●Shigeharu Kinoshita, Gen Kaneko, Jeen H. Lee, Kiyoshi Kikuchi, Hiroshi Yamada, Takeya Hara, Yasuo Itoh, and Shugo Watabe: "A novel heat stress-responsive gene in the marine diatom Chaetoceros compressum encoding two types of transcripts, a trypsin-like protease and its related protein, by alternative RNA splicing." Eur. J. Biochem., 268, 4599-4609 (2001).
●Shigeharu Kinoshita, Shiro Itoi, and Shugo Watabe: "cDNA cloning and characterization of the warm-temperature-acclimation-associated protein Wap65 from Carp, Cyprinus carpio." Fish Physiol. Biochem., 24. 125-134 (2001).
●Yoshihiro Ochiai, Kashfia Ahmed, Nazmul Ahsan, Daisuke Funabara, Misako Nakaya, and Shugo Watabe: "cDNA cloning and deduced amino acid sequence of tropomyosin from fast skeletal muscle of white croaker Pennahia argentata." Fisheries Sci., 67(3), 556-558 (2001).
●Daisuke Funabara, Misako Nakaya, and Shugo Watabe: "A novel 45 kDa calponin-like protein from molluscan catch muscle inhibits actomyosin Mg2+-ATPase activity." Fisheries Sci., 67(3), 511-517 (2001).
●Md. Nazmul Ahsan and Shugo Watabe: "Kinetic and structural properties of two isoforms of trypsin isolated from the viscera of Japanese anchovy Engraulis japonicus." J. Protein Chem., 20(1), 49-58 (2001).
●Shiro Itoi, Toshinao Ineno, Shigeharu Kinoshita, Yasushi Hirayama, Misako Nakaya, Makoto Kakinuma, and Shugo Watabe: "Analysis on serum proteins from rainbow trout Oncorhynchus mykiss exposed to high temperature. " Fisheries Sci., 67, 191-193 (2001).
●Hidehiro Kondo, Ichiro Kawazoe, Misako Nakaya, Kiyoshi Kikuchi, Katsumi Aida, and Shugo Watabe: "The novel structure of major plasma apolipoproteins in the eel Anguilla japonica." Biochim. Biophys. Acta, 1351, 132-142 (2001).
●Daisuke Funabara, Shigeharu Kinoshita, Shugo Watabe, Marion J. Siegman, Thomas M. Butler, and David J. Hartshorne: "Phosphorylation of molluscan twitchin by the cAMP-dependent protein kinase." Biochemistry, 40 (7), 2087-2095 (2001).
●Md. Nazmul Ahsan, Daisuke Funabara, and Shugo Watabe: "Molecular cloning and characterization of two isoforms of trypsinogen from anchovy pyloric caeca. " Marine Biotechnol., 3, 80-90 (2001).
●瀬崎啓次郎、久保島康子、三谷勇、福井篤、渡部終五 "ミトコンドリア・シトクロームb遺伝子によるマサバおよびゴマサバの種判別とホルマリン固定浮遊卵への応用." 日水誌, 67(1), 17-22 (2001).
2000
●Sung Ho Yoon, Makoto Kakinuma, Yasushi Hirayama, Tsuneji Yamamoto, and Shugo Watabe: "cDNA cloning and characterization of the complete primary structure for myosin heavy chain of white croaker fast skeletal muscle." Fisheries Sci., 66(6), 1158-1162 (2000).
●Shun-ichi Wada, Shigeki Matsunaga, Nobuhiro Fusetani, and Shugo Watabe: "Interaction of cytotoxic bicyclic peptides, theonellamides A and F, with glutamate dehydrogenase and 17β-hydroxysteroid dehydrogenase IV." Marine Biotechnol., 2, 285-292 (2000).
●Atsushi Kobiyama, Yoshiaki Nihei, Yasushi Hirayama, Misako Nakaya, Kiyoshi Kikuchi, and Shugo Watabe: "Expression changes of transcripts for fast skeletal myosin heavy chain isoforms during warm temperature acclimation of carp in relation to those of myoD and MEF2 families." Fisheries Sci., 66, 761-767 (2000).
●Chie Yoneda, Md. Nazmul Ahsan, Misako Nakaya, Youco Matsubara, Tetsuya Ebihara, Shinkici Irie, Yuko Uno, Keiko Hatae, and Shugo Watabe: "Abalone collagens: immunological properties and seasonal changes of their mRNA levels. Comp." Biochem. Physiol., 126B, 59-68 (2000).
●Makoto Kakinuma, Akimasa Hatanaka, Hideto Fukushima, Misako Nakaya, Kayo Maeda, Yukio Doi, Tatsuo Ooi, and Shugo Watabe: "Differential scanning calorimetry of light meromyosin fragments having various lengths of carp fast skeletal muscle isoforms. " J. Biochem., 128, 11 - 20 (2000).
●Sachi SriKantha, Masao Takeuchi, Shugo Watabe, and Hirotomo Ochi: "HPLC determination of carnosine in commercial can soups and natural meat extracts Lebensm. " Wiss. Technol. 33, 60-62 (2000).
●Marie Togashi, Makoto Kakinuma, Yasushi Hirayama, Hideto Fukushima, Shugo Watabe, Takao Ojima, and Kiyoyoshi Nishita: "cDNA cloning of myosin and the complete primary structure of myosin heavy chain of walleye pollack fast skeletal muscle. " Fisheries Sci., 66, 349-357 (2000).
●Naoya Oku, Shigeki Matsunaga, Shun-ichi Wada, Shugo Watabe, and Nobuhiro Fusetani: "New isomalabaricane triterpenes from the marine sponge Stelletta globostellata that induce morphological changes in rat fibroblasts." J. Nat. Prod., 63, 205-209 (2000).
●Yasushi Hirayama, Kazuo Sutoh, and Shugo Watabe: "Structure-function relationships of the two surface loops of myosin heavy chain isoforms from thermally acclimated carp." Biochem. Biophys. Res. Commun., 269, 237-241 (2000).
●Shugo Watabe, Keiko Iwasaki, Daisuke Funabara, Yasushi Hirayama, Misako Nakaya, and Kiyosi Kikuchi: "Complete amino acid sequence of Mytilus anterior byssus retractor paramyosin and its putative phosphorylation site." J. Exp. Zool., 286 24-25 (2000).
1999
●Shun-ichi Wada, Shigeki Matsunaga, Nobuhiro Fusetani, and Shugo Watabe: "Theonellide F, a bicyclic marine toxin, induces formation of vacuoles in 3Y1 rat embryonic fibroblast. " Marine Biotechnol. 1, 337-341 (1999).
●Kiyoshi Kikuchi, Shiro Itoi, and Shugo Watabe: "Increased levels of mitochondrial ATP synthase ?-subunit in fast skeletal muscle of carp acclimated to cold temperature. " Fisheries Sci., 65 (4), 629-636 (1999).
●Yoshiaki Nihei, Atsushi Kobiyama, Yasushi Hirayama, Kiyoshi Kikuchi, and Shugo Watabe: "The mRNA expression patterns of E12 transcription factor in various developmental stages and adult tissues of carp." Fisheries Sci., 64 (4) 600-605 (1999).
●Keijiro Sezaki, Rowshan Ara Begum, Prachit Wongrat, Mansha Prasad Srivastava, Sachi SriKantha, Kiyoshi Kikuchi, Hajime Ishihara, Sho Tanaka, Toru Taniuchi, and Shugo Watabe: "Molecular phylogeny of Asian freshwater and marine stingrays based on the DNA nucleotide and deduced amino acid sequences of the cytochrome b. " Fisheries Sci. 65 (4), 563-570 (1999).
●Noriko U. Sata, Shun-ichi Wada, Shigeki Matsunaga, Shugo Watabe, Rob W. W. van Soest, and Nobuhiro Fusetani: "Rubrosides A-H, new bioactive tetramic acid glycosides from the marine sponge Siliquariaspongia japonica." J. Org. Chem., 64 (7), 2331-2339 (1999).
●Satoshi Kanoh, Eiji Miwa, Yoshiki Osaka, and Shugo Watabe: "Effects of urea on actin-activated Mg2+-ATPase of requiem shark myosin." Comp. Biochem. Physiol., 122B (3), 333-338 (1999).
●Chie Yoneda, Yasushi Hirayama, Misako Nakaya, Youco Matsubara, Shinkichi Irie, Keiko Hatae, and Shugo Watabe: "The occurrence of two types of collagen pro?-chain in the abalone Haliotis discus muscle." Eur. J. Biochem., 261, 714-721 (1999).
●Kiyoshi Kikuchi, Maiko Muramatsu, Yasushi Hirayama, and Shugo Watabe: "Characterization of the carp myosin heavy chain multigene family. " Gene, 228, 189-196 (1999).
●Hidehiro Kondo, Ichiro Kawazoe, Misako Nakaya, Kiyoshi Kikuchi, Katsumi Aida, and Shugo Watabe: "The two types of 28 kDa-apolipoprotein in eel plasma. " Fisheries Sci., 65 (3), 498-499 (1999).
●Daisuke Ikeda, Shun-ichi Wada, Chie Yoneda, Hiroki Abe, and Shugo Watabe: "Carnosine stimulates vimentin expression in cultured rat fibroblasts. " Cell Struct. Function, 24 (1), 79-87 (1999).
1998
●Sachi SriKantha, Shun-ichi Wada, Masao Takeuchi, Shugo Watabe, and Hirotomo Ochi: "Use of Cu(II)/ascorbate system in the screening for hydroxyl radical scavenging activity in food extracts via an ELISA for 8-hydroxy deoxyguanosine. " ACS Symp. Ser. 702., 244-250 (1998).
●Shigeharu Kinoshita, Kiyoshi Kikuchi, Hiroshi Yamada, Takeya Hara, Yasuo Itoh, Hideaki Kinoshita, and Shugo Watabe: "Differntial expression of mRNAs in the marine diatom Chaetoceros compressusm exposed to high temperatures. " Fisheries Sci., 64 (5), 831-835 (1998).
●Takao Ojima, Nagako Kawashima, Akira Inoue, Akiko Amauchi, Marie Togashi, Shugo Watabe, and Kiyoyoshi Nishita: "Determination of primary structure of heavy meromyosin region of walleye pollack myosin heavy chain by cDNA cloning. " Fisheries Sci., 64 (5), 812-819 (1998).
●Yasushi Hirayama, Atsushi Kobiyama, Yoshihiro Ochiai, and Shugo Watabe: "Two types of mRNA encoding myosin regulatory light chain in carp fast skeletal muscle differ in their 3' non-coding regions and expression patterns following temperature acclimation." J. Exp. Biol., 201, 2815-2820 (1998).
●Atsushi Kobiyama, Yoshiaki Nihei, Yasushi Hirayama, Kiyoshi Kikuchi, Hiroaki Suetake, Ian A. Johnston, and Shugo Watabe: "Molecular cloning and developmental expression patterns of the myoD and MEF2 families of muscle transcription factors in the carp. " J. Exp. Biol., 201, 2801-2813 (1998).
●Makoto Kakinuma, Misako Nakaya, Akimasa Hatanaka, Yasushi Hirayama, Shugo Watabe, Kayo Maeda, Tatsuo Ooi, and Suechika Suzuki: "Thermal unfolding of three acclimation temperature-associated isoforms of carp light meromyosin expressed by recombinant DNAs. " Biochemistry, 37 (18), 6606-6613 (1998).
●Kiyoshi Kikuchi, Shugo Watabe, and Katsumi Aida: "Isolation of the 65-kDa protein from warm temperature-acclimated goldfish (Carassius auratus)." Comp. Biochem. Physiol., 120B, 385-391 (1998).
●Marion J. Siegman, Daisuke Funabara, Shigeharu Kinoshita, Shugo Watabe, David J. Hartshorne, and Thomas M. Butler: "Phosphorylation of a twitchin-related protein controls catch and calcium sensitivity of force production in invertebrate smooth muscle." Proc. Natl. Acad. Sci. USA, 95, 5383-5388 (1998).
●Shun-ichi Wada, Shigeki Matsunaga, Shin-ya Saito, Nobuhiro Fusetani, and Shugo Watabe: "Actin-binding specificity of macrolide marine toxins, mycaloride B and kabiramide D." J. Biochem., 123, 946-952 (1998).
●Shin-ya Saito, Shugo Watabe, Hiroshi Ozaki, Motomasa Kobayashi, Tadahiko Suzuki, Haruo Kobayashi, Nobuhiro Fusetani, and Hideaki Karaki: "Actin depolymerizing effect of dimeric macrolide, bistheonellide A and swinholide A." J. Biochem. 123 (4), 571-578 (1998).
1997
●Misako Nakaya, Makoto Kakinuma, Shugo Watabe, and Tatsuo Ooi: "Differential scanning calorimetry and CD spectrometry of acclimation temperature-associated types of carp light meromyosin. " Biochemistry, 36 (30), 9197-9184 (1997).
●Makoto Kakinuma, Daisuke Funabara, Misako Nakaya, Yasushi Hirayama, Shugo Watabe, Kayo Maeda, and Tatsuo Ooi: "Thermal unfolding of the cold-acclimated type of carp light meromyosin expressed by recombinant DNA in Escherichia coli. " Fisheries Sci., 63 (6), 1008-1013 (1997).
●Marion J. Siegman, Susan U. Mooers, Chenqing Li, Srinivasa Narayan, Laura Trinkle-Mulcahy, Shugo Watabe, David J. Hartshorne, and Thomas M. Butler: "Phosphorylation of a high molecular weight (〜600 kDa) protein regulates catch in invertebrate smooth muscle. " J. Muscle Res. Cell Motil., 18, 655-670 (1997).
●Keiko Iwasaki, Kiyoshi Kikuchi, Daisuke Funabara, and Shugo Watabe: "cDNA cloning of tropomyosin from the anterior byssus retractor muscle of mussel and its structural integrity from the deduced amino acid sequence." Fisheries Sci., 63 (5), 731-734 (1997).
●Kiyoshi Kikuchi, Shugo Watabe, and Katsumi Aida: "The Wap65 gene expression of goldfish (Carassius auratus) in associatin with warm temperature as well as bacterial lipopolisaccharide (LPS). " Fish Physiol. Biochem., 17, 423-432 (1997).
●Yasushi Hirayama and Shugo Watabe: "Structural differences in the crossbridge head of temperature- associated myosin subfragment-1 isoforms from carp fast skeletal muscle. " Eur. J. Biochem., 246, 380-387 (1997).
●Misako Nakaya and Shugo Watabe: "Protease susceptibility of fast skeletal myosin heavy chain from carp acclimated to cold and warm temperatures." Fisheries Sci., 63 (3), 462-465 (1997).
●Yutaka Kariya, Shugo Watabe, Mamoru Kyogashima, Masayuki Ishihara, and Tadashi Ishii: "The structure of branching fucans in the glycosaminoglycan from the body wall of the sea cucumber Stichopus japonicus. " Carbohydrate Res., 297, 273-279 (1997).
●Yasushi Hirayama, Satoshi Kanoh, Misako Nakaya, and Shugo Watabe: "The two essential light chains of carp fast skeletal myosin, LC1 and LC3, are encoded by distinct gene and change their molar ration following gemperature acclimation." J. Exp. Biol., 200, 693-701 (1997).
●Jun-ichi Imai, Yasushi Hirayama, Kiyoshi Kikuchi, Makoto Kakinuma, and Shugo Watabe: "cDNA cloning of myosin heavy chain isoforms from carp fast skeletal muscle and their gene expression associated with temperature acclimation. " J. Exp. Biol., 200, 27-34 (1997).
●Chie Tanaka-Yoneda, Shugo Watabe, Misako Nakaya, and Keiko Hatae: "Isolation and characterization of a 148 kDa protein possibly participating in collagen metabolism of abalone adductor muscle. " Fisheries Sci., 63 (1),115-121 (1997).
1996
●Sachi SriKantha, Shun-ichi Wada, Masao Takeuchi, Shugo Watabe, and Hirotomo Ochi: "A sensitive method to screen for hydroxy radical scavenging activity in natural food extracts using competitive inhibition ELISA for 8-hydroxy deoxyguanosine." Biotechnol. Technique, 10 (12), 933-936 (1996).
●Shigeru Chaen, Misako Nakaya, Xiao-Feng Guo, and Shugo Watabe: "Lower activation energy for sliding velocity of F-actin on a less thermostable isoform of carp myosin." J. Biochem., 120 (4), 788-791 (1996).
●Shin-ya Saito, Shugo Watabe, Hiroshi Ozaki, Hideo Kigoshi, Kiyoyuki Yamada, Nobuhiro Fusetani, and Hideaki Karaki: "Novel actin depolymerizing macrolide aplyronine A." J. Biochem., 120 (3), 552-555 (1996).
●Keiko Hatae, Hitomi Nakai, Chie Tanaka, Atsuko Shimada, and Shugo Watabe: "Taste and texture of abalone meat after extended cooking." Fisheries Sci., 62 (4), 643-647 (1996).
●Shugo Watabe, Shun-ichi Wada, Shin-ya Saito, Shigeki Matsunaga, Nobuhiro Fusetani, Hiroshi Ozaki, and Hideaki Karaki: "Cellular changes of rat embryonic fibroblasts by an actin-depolymerization inhibitor, bistheonellide A, from a marine sponge." Cell Struct. Function, 21 (3),199-211 (1996).
●Sachi SriKantha, Shun-ichi Wada, Hideomi Tanaka, Masao Takeuchi, Shugo Watabe, Hirotomo Ochi: "Carnosine sustains the retention of cell morphology in continuous fibroblast culture subjected to nutritional insult. " Biochem. Biophys. Res. Commun., 223 (2), 278-282 (1996).
●Toru Kitamura, Akira Takemura, Shugo Watabe, Toru Taniuchi, and Makoto Shimizu: "Molecular phylogeny of the sharks and rays of superorder Squalea based on mitochondrial cytochrome b gene. " Fisheries Sci., 62 (3), 340-343 (1996).
●Toru Kitamura, Akira Takemura, Shugo Watabe, Toru Taniuchi, and Makoto Shimizu: "Mitochondrial DNA analysis for the cytochrome b gene and D-loop region from the bull shark Carcharhinus leucas. " Fisheries Sci., 62 (1), 21-27 (1996).
1995
●Shugo Watabe, Yasushi Hirayama, Jun-ichi Imai, Kiyoshi Kikuchi, and Michiaki Yamashita: "Sequences of cDNA clones encoding α-actin of carp and goldfish skeletal muscles." Fisheries Sci., 61 (6), 998-1003 (1995).
●Shigeru Okada, Shah Amran Nur-E-Borhan, Shugo Watabe, and Katsumi Yamaguchi: "Changes in body color appearance of the black tiger prawn Penaeus monodon. " Fisheries Sci., 61 (6), 964-967 (1995).
●Shah Amran Nur-E-Borhan, Shigeru Okada, Shugo Watabe, and Katsumi Yamaguchi: "Carotenoproteins from the exoskeleton and the muscular epithelium of the black tiger prawn Penaeus monodon." Fisheries Sci., 61 (2), 337-343 (1995).
●Kiyoshi Kikuchi, Michiaki Yamashita, Shugo Watabe, and Katsumi Aida: "The warm temperature acclimation-related 65-kDa protein, Wap65, in goldfish and its gene expression. " J. Biol. Chem., 270 (29), 17087-17092 (1995).
●Keiko Hatae, Hitomi Nakai, Atsuko Shimada, Tetsushi Murakami, Keiichiro
Takada, Yoshioki Shirojo, and Shugo Watabe: "Abalone (Haliotis discus):
Seasonal variations of chemical and textural properties." J. Food
Sci., 60 (1), 32-35&39 (1995).
●Shugo Watabe, Jun-ichi Imai, Misako Nakaya, Yasushi Hirayama, Yoh Okamoto, Haruhiko Masaki, Takeshi Uozumi, Ikuo Hirono, and Takashi Aoki: "Temperature acclimation induces light meromyosin isoforms with different primary structures in carp fast skeletal muscle." Biochem. Biophys. Res. Commun., 208 (1), 118-125 (1995).
●Misako Nakaya, Shugo Watabe, and Tatsuo Ooi: "Differences in the thermal stability of acclimation temeprature-associated carp myosin and its rod isoforms on differential scanning calorimetry. " Biochemistry, 34 (9), 3114-3120 (1995).
1994
●Shin-ya Saito, Shugo Watabe, Hiroshi Ozaki, Nobuhiro Fusetani, and Hideaki Karaki: "Mycaloride B, a novel actin depolymerizing agent. " J. Biol. Chem., 269 (47), 29710-29714 (1994).
●Xiao-Feng Guo, Misako Nakaya, and Shugo Watabe: "Myosin subfragment-1 isoforms having different heavy chain structures from fast skeletal muscle of thermally acclimated carp." J. Biochem., 116 (4), 728-735 (1994).
●Shugo Watabe, Xial-Feng Guo, and Gyu-Chul Hwang: "Carp expresses specific isoforms of the myosin cross-bridge head, subfragment-1, in association with cold and warm temperature acclimation." J. Therm. Biol., 19 (4), 261-268 (1994).
●Keijiro Sezaki, Shugo Watabe, Yoshihiro Ochiai, and Kanehisa Hashimoto: "Biochemical genetic evidence for a hybrid origin of spined loach, Cobitis taenia taenia Linnaeus, in Japan. " J. Fish Biol., 44, 683-691 (1994).
●Hideki Ushio and Shugo Watabe: "Carp parvalbumin binds to and directly interacts with the sarcoplasmic reticulum for Ca2+ translocation." Biochem. Biophys. Res. Commun., 199 (1), 56-62 (1994).
●Misako Nakaya and Shugo Watabe: "Monoclonal antibodies raised against carp myosin. " Fisheries Sci., 60 (1), 47-52 (1994).
●Hideki Ushio and Shugo Watabe: "Carp sarcoplasmic reticulum changes due to heat treatment." J. Food Sci., 59, 80-84 (1994).
1993
●Nobuyuki Ohkubo, Shugo Watabe, Takashi Oshiro, Fumio Takashima, and Hiroshi Nakajima: "Subunit structures of multiple hemoglobins in carp. " J. Comp. Physiol. B, 163 (6), 445-451 (1993).
●Kiyoshi Kikuchi, Shugo Watabe, Katsumi Aida, and Hiroshi Nakajima: "The 65-kDa cytosolic protein associated with warm temperature acclimation in goldfish, Carassius auratus. " J. Comp. Physiol. B, 163 (5), 349-354 (1993).
●Hideki Ushio, Shugo Watabe, and Masamitsu Iino: "Crayfish skeletal muscle requires both influx of external Ca2+ and Ca2+ release from internal stores for contraction. " J. Exp. Biol., 181, 95 -103 (1993).
●Hideki Ushio and Shugo Watabe: "Ultrastructural and biochemical analysis of the sarcoplasmic reticulum from crayfish fast and slow striated muscles." J. Exp. Zool., 267 (1), 9 -18 (1993).
●Hideki Ushio and Shugo Watabe: "Effects of temperature acclimation on Ca2+-ATPase of the carp sarcoplasmic reticulum." J. Exp. Zool., 265 (1), 9-17 (1993).
●Xiao-Feng Guo and Shugo Watabe: "ATPase activity and thermostability of actomyosins from thermally acclimated carp." Nippon Suisan Gakkaishi, 59 (2), 363-369 (1993).
●Shugo Watabe, Kiyoshi Kikuchi, and Katsumi Aida: "Cold- and warm-temperature acclimation induces specific cytosolic proteins in goldfish and carp. " Nippon Suisan Gakkaishi, 59 (1), 151-156 (1993).
●Raul Porturas Olaechea, Hideki Ushio, Shugo Watabe, Keiichiro Takada, and Keiko Hatae: "Toughness and collagen content of abalone muscle. " Biosci. Biotech. Biochem., 57 (1), 6-11 (1993).
1992
●Long Bin Ma, Hideaki Yamanaka, Hideki Ushio, and Shugo Watabe: "Studies on the mechanism of thaw rigor in carp. " Nippon Suisan Gakkaishi, 58 (8), 1535-1540 (1992).
●Shugo Watabe, Gyu-Chul Hwang, Misako Nakaya, Xiao-Feng Guo, and Yoh Okamoto: "Fast skeletal myosin isoforms in thermally acclimated carp." J. Biochem., 111 (1), 113-122 (1992).
1991
●Shugo Watabe: "Electrophoretic analyses of freshwater elasmobranchs from northern Australia and Papua New Guinea. " Univ. Mus., Univ. Tokyo, Nature and Culture. No.3, 103-109 (1991).
●Shugo Watabe, Gyu-Chul Hwang, Hideki Ushio, Hideaki Yamanaka, Keiko Hatae, and Kanehisa Hashimto: "Short thermal treatment effect on carp myofibril and sarcoplasmic reticulum: possible mechanisms in rigor mortis acceleration by "arai" treatment." J. Food Sci., 56 (3), 653-656 (1991).
●Mohamed Kamal, Shugo Watabe, and Kanehisa Hashimoto: "Postmortem changes in myofibrillar ATPase of sardine ordinary and dark muscles. " Nippon Suisan Gakkaishi, 57 (6), 1177-1184 (1991).
●Keiko Hatae, Shugo Watabe, Yasuo Okajima, Masataka Shirai, Atsuko Shimada, and Hideaki Yamanaka: "Differences in the ultrastructure of carp muscle slices due to varying "arai" treatment: an electron microscopic observation." Agric. Biol. Chem., 55 (6), 1593-1600 (1991).
●Hideki Ushio, Shugo Watabe, Muneaki Iwamoto, and Kanehisa Hashimoto: "Ultrastructural evidence for temperature-dependent Ca2+ release from fish sarcoplasmic reticulum during rigor mortis." Food Strucure, 10 (3), 267-275 (1991).
●Shugo Watabe, Hideki Ushio, and Kanehisa Hashimoto: "Purification and characterization of a calsequestrin-like calcium-binding protein from carp (Cyprinus carpio) sarcoplasmic reticulum." Comp. Biochem. Physiol., 99B (3), 545-552 (1991).
●Gyu-Chul Hwang, Yoshihiro Ochiai, Shugo Watabe, and Kanehisa Hashimoto: "Changes of carp myosin subfragment-1 induced by temperature acclimation." J. Comp. Physiol. B, 161, 141-146 (1991).
●Shugo Watabe, Mohamed Kamal, and Kanehisa Hashimoto: "Postmortem changes in ATP, creatine phosphate, and lactate in sardine muscle." J. Food Sci., 56 (1), 151-153 (1991).
●Lynn Chartier, Lucinda L. Rankin, Ronald E. Allen, Yuko Kato, Nobuhiro Fusetani, Hideaki Karaki, Shugo Watabe, and David J. Hartshorne: "Calyculin-A increases the level of protein phosphorylation and changes the shape of 3T3 fibroblasts. " Cell Motil. Cytoskeleton, 18, 26-40 (1991).
●Keijiro Sezaki, Shugo Watabe, Katsumi Tsukamoto, and Kanehisa Hashimoto: "Effects of increase in ploidy status on repiratory function of ginbuna, Carassiusauratus lonfsdorfi (Cyprinidae)." Comp. Biochem. Physiol., 99A (1/2), 123-127 (1991).
●Gyu-Chul Hwang, Hideki Ushio, Shugo Watabe, Muneaki Iwamoto, and Kanehisa Hashimoto: "The effect of thermal acclimation on rigor mortis progress of carp stored at different temperature. " Nippon Suisan Gakkaishi, 57 (3), 541-548 (1991).
●岩本宗昭, 山中英明, 渡部終五, 橋本周久 "種々の貯蔵温度におけるイタヤガイ閉殻筋中のATP関連化合物の消長. " 日水誌, 57 (1), 153-156 (1991).